Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DDQ68_RS01880 | Not Available | Negative | 453054 - 453230 | 6251.65 |
| hypothetical protein | DDQ68_RS01885 | Not Available | Negative | 453302 - 453778 | 17323.2 |
| heavy metal translocating p-type atpase | DDQ68_RS01890 | Not Available | Positive | 454199 - 456463 | 79744.2 |
| cupredoxin domain-containing protein | DDQ68_RS01895 | Not Available | Positive | 456476 - 456853 | 13620.6 |
| helix-turn-helix domain-containing protein | DDQ68_RS01900 | Not Available | Positive | 456865 - 457488 | 22848.6 |
| transposase | DDQ68_RS24190 | Not Available | Positive | 457659 - 457787 | 4726.68 |
| transposase | DDQ68_RS22380 | Not Available | Positive | 457796 - 458038 | 8831.57 |
| is5 family transposase | DDQ68_RS01905 | Not Available | Positive | 458035 - 458421 | 14433.1 |
| transposase | DDQ68_RS01910 | Not Available | Negative | 458352 - 458912 | 21292.6 |
| is5/is1182 family transposase | DDQ68_RS01915 | Not Available | Negative | 459027 - 459932 | 33741.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
