Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding transpeptidase domain-containing protein | DDQ68_RS19080 | Not Available | Positive | 4285571 - 4287406 | 67737.0 |
| type ii toxin-antitoxin system yoeb family toxin | DDQ68_RS19085 | Not Available | Positive | 4287651 - 4287818 | 6396.67 |
| nadh-quinone oxidoreductase subunit n | DDQ68_RS19090 | Not Available | Negative | 4288007 - 4289410 | 49335.9 |
| complex i subunit 4 family protein | DDQ68_RS19095 | Not Available | Negative | 4289510 - 4290976 | 52944.2 |
| trna 2-selenouridine(34) synthase mnmh | DDQ68_RS19100 | Not Available | Positive | 4291155 - 4292195 | 37069.5 |
| hypothetical protein | DDQ68_RS23550 | Not Available | Negative | 4292201 - 4292338 | 4834.79 |
| voc family protein | DDQ68_RS23555 | Not Available | Positive | 4292386 - 4292589 | 7290.47 |
| selenide, water dikinase seld | DDQ68_RS23560 | Not Available | Positive | 4292648 - 4293712 | 37192.6 |
| glutamate--trna ligase family protein | DDQ68_RS23095 | Not Available | Positive | 4293694 - 4294599 | 32823.2 |
| deoxyribonuclease v | DDQ68_RS19120 | Not Available | Negative | 4294611 - 4295300 | 25255.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
