Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DDQ68_RS18890 | Not Available | Negative | 4245864 - 4246301 | 15738.8 |
| l-glutamate gamma-semialdehyde dehydrogenase | DDQ68_RS18895 | Not Available | Negative | 4246651 - 4248315 | 60632.2 |
| yjjg family noncanonical pyrimidine nucleotidase | DDQ68_RS18900 | Not Available | Negative | 4248380 - 4249072 | 26194.9 |
| (2fe-2s) ferredoxin domain-containing protein | DDQ68_RS18905 | Not Available | Negative | 4249182 - 4249502 | 11494.9 |
| arsr/smtb family transcription factor | DDQ68_RS18910 | Not Available | Negative | 4249536 - 4249934 | 15801.2 |
| carboxypeptidase-like regulatory domain-containing protein | DDQ68_RS18915 | Not Available | Positive | 4250037 - 4250729 | 25039.2 |
| nad(p)/fad-dependent oxidoreductase | DDQ68_RS18920 | Not Available | Positive | 4250839 - 4252209 | 50090.4 |
| m16 family metallopeptidase | DDQ68_RS18925 | Not Available | Negative | 4252363 - 4253646 | 46668.2 |
| type ix secretion system outer membrane channel protein porv | DDQ68_RS18930 | Not Available | Negative | 4253779 - 4255014 | 43735.4 |
| type ix secretion system sortase poru | DDQ68_RS18935 | Not Available | Negative | 4255071 - 4259081 | 142858.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
