Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | DDQ68_RS01830 | Not Available | Positive | 443222 - 443755 | 19954.0 |
| phosphatase pap2 family protein | DDQ68_RS01835 | Not Available | Positive | 444242 - 445060 | 29650.8 |
| hypothetical protein | DDQ68_RS01840 | Not Available | Negative | 445610 - 445795 | 6238.38 |
| is5/is1182 family transposase | DDQ68_RS01845 | Not Available | Negative | 446246 - 446518 | 9616.6 |
| hypothetical protein | DDQ68_RS01850 | Not Available | Positive | 446680 - 447195 | 18881.0 |
| hypothetical protein | DDQ68_RS01855 | Not Available | Positive | 447220 - 447441 | 8014.85 |
| multicopper oxidase domain-containing protein | DDQ68_RS01860 | Not Available | Negative | 447998 - 450508 | 94009.3 |
| cupin domain-containing protein | DDQ68_RS01865 | Not Available | Negative | 451173 - 451772 | 21649.5 |
| four-helix bundle copper-binding protein | DDQ68_RS01870 | Not Available | Negative | 451960 - 452292 | 11700.1 |
| helix-turn-helix transcriptional regulator | DDQ68_RS01875 | Not Available | Negative | 452370 - 452996 | 22779.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
