Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase | DDQ68_RS18785 | Not Available | Negative | 4226967 - 4227500 | 19144.1 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DDQ68_RS18790 | Not Available | Negative | 4227524 - 4228516 | 35511.0 |
| dhh family phosphoesterase | DDQ68_RS18795 | Not Available | Negative | 4228584 - 4229630 | 38387.6 |
| nucleoside-diphosphate kinase | DDQ68_RS18800 | Not Available | Positive | 4229853 - 4230260 | 14713.5 |
| nucleoside permease | DDQ68_RS18805 | Not Available | Negative | 4230510 - 4231790 | 47244.5 |
| superoxide dismutase | DDQ68_RS18810 | Not Available | Negative | 4232003 - 4232608 | 22291.2 |
| nucleoside deaminase | DDQ68_RS18815 | Not Available | Negative | 4232699 - 4233130 | 15526.8 |
| hypothetical protein | DDQ68_RS18820 | Not Available | Negative | 4233199 - 4233744 | 19917.2 |
| hypothetical protein | DDQ68_RS18825 | Not Available | Negative | 4233769 - 4234203 | 15553.1 |
| aspartate--trna ligase | DDQ68_RS18830 | Not Available | Positive | 4234425 - 4236188 | 66254.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
