Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydrolase | DDQ68_RS18685 | Not Available | Positive | 4206091 - 4207347 | 46788.6 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 4207980 - 4209495 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 4209718 - 4212644 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4212752 - 4212863 | Not Available |
| is5/is1182 family transposase | DDQ68_RS18705 | Not Available | Negative | 4213165 - 4213498 | 10753.0 |
| hypothetical protein | DDQ68_RS24860 | Not Available | Negative | 4213659 - 4213796 | 5087.17 |
| is1 family transposase | DDQ68_RS23085 | Not Available | Negative | 4213833 - 4214135 | 11600.8 |
| rod shape-determining protein roda | DDQ68_RS18715 | Not Available | Positive | 4215038 - 4216333 | 47640.6 |
| is3 family transposase | DDQ68_RS18720 | Not Available | Positive | 4216426 - 4217522 | 42358.9 |
| is630 family transposase | DDQ68_RS18725 | Not Available | Negative | 4217738 - 4218436 | 26940.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
