Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | DDQ68_RS18440 | Not Available | Negative | 4151694 - 4152329 | 23599.3 |
| stas/sec14 domain-containing protein | DDQ68_RS18445 | Not Available | Negative | 4152566 - 4152958 | 14200.9 |
| mfs transporter | DDQ68_RS18450 | Not Available | Positive | 4153084 - 4154394 | 46120.1 |
| comea family dna-binding protein | DDQ68_RS18455 | Not Available | Negative | 4154540 - 4155550 | 37594.5 |
| alpha/beta fold hydrolase | DDQ68_RS18460 | Not Available | Negative | 4155805 - 4157223 | 48148.9 |
| alpha/beta hydrolase family protein | DDQ68_RS18465 | Not Available | Negative | 4157253 - 4158725 | 51739.2 |
| is5/is1182 family transposase | DDQ68_RS18470 | Not Available | Positive | 4158950 - 4159933 | 35939.0 |
| transposase | DDQ68_RS18475 | Not Available | Negative | 4159937 - 4161049 | 41807.3 |
| is5/is1182 family transposase | DDQ68_RS18480 | Not Available | Positive | 4161131 - 4162999 | 68314.2 |
| duf2251 domain-containing protein | DDQ68_RS18485 | Not Available | Positive | 4163006 - 4163404 | 13943.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
