Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exosortase x | DDQ68_RS01780 | Not Available | Negative | 429817 - 430362 | 19933.1 |
| pid-cterm protein-sorting domain-containing protein | DDQ68_RS01785 | Not Available | Negative | 430657 - 430872 | 7097.79 |
| duf4331 family protein | DDQ68_RS01790 | Not Available | Negative | 430975 - 434760 | 131711.0 |
| duf4331 domain-containing protein | DDQ68_RS01795 | Not Available | Negative | 434794 - 436533 | 61780.0 |
| tonb-dependent receptor | DDQ68_RS01800 | Not Available | Negative | 437212 - 439536 | 84526.5 |
| hypothetical protein | DDQ68_RS01805 | Not Available | Negative | 439669 - 440064 | 13887.7 |
| hupe/urej family protein | DDQ68_RS01810 | Not Available | Negative | 440232 - 440912 | 24639.9 |
| tetratricopeptide repeat protein | DDQ68_RS01815 | Not Available | Negative | 440924 - 442252 | 48914.0 |
| hypothetical protein | DDQ68_RS01820 | Not Available | Positive | 442514 - 442708 | 7254.87 |
| hypothetical protein | DDQ68_RS01825 | Not Available | Negative | 442761 - 443039 | 10318.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
