Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| psts family phosphate abc transporter substrate-binding protein | DDQ68_RS18240 | Not Available | Negative | 4106139 - 4107134 | 36128.4 |
| energy transducer tonb | DDQ68_RS18245 | Not Available | Negative | 4107663 - 4108493 | 30074.3 |
| biopolymer transporter exbd | DDQ68_RS18250 | Not Available | Negative | 4108490 - 4108951 | 17430.4 |
| exbd/tolr family protein | DDQ68_RS18255 | Not Available | Negative | 4109060 - 4109689 | 23021.0 |
| mota/tolq/exbb proton channel family protein | DDQ68_RS18260 | Not Available | Negative | 4109767 - 4110654 | 31119.8 |
| nucleoside triphosphate pyrophosphohydrolase | DDQ68_RS18265 | Not Available | Negative | 4110934 - 4111800 | 32254.2 |
| phosphoglucosamine mutase | DDQ68_RS18270 | Not Available | Positive | 4111876 - 4113273 | 49474.4 |
| cysteine desulfurase family protein | DDQ68_RS18275 | Not Available | Positive | 4113388 - 4114530 | 40732.3 |
| t9ss type a sorting domain-containing protein | DDQ68_RS18280 | Not Available | Negative | 4114768 - 4115970 | 41871.2 |
| hypothetical protein | DDQ68_RS18285 | Not Available | Positive | 4116716 - 4117312 | 20591.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
