Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potra domain-containing protein | DDQ68_RS18190 | Not Available | Positive | 4094131 - 4095579 | 54222.2 |
| nad kinase | DDQ68_RS18195 | Not Available | Positive | 4095655 - 4096548 | 32169.5 |
| duf6089 family protein | DDQ68_RS18200 | Not Available | Positive | 4096687 - 4097562 | 32241.9 |
| duf6089 family protein | DDQ68_RS18205 | Not Available | Positive | 4097614 - 4098381 | 27996.1 |
| isoprenyl transferase | DDQ68_RS18210 | Not Available | Positive | 4098541 - 4099287 | 27650.3 |
| outer membrane protein assembly factor bama | DDQ68_RS18215 | Not Available | Positive | 4099312 - 4101825 | 92940.5 |
| omph family outer membrane protein | DDQ68_RS18220 | Not Available | Positive | 4101867 - 4102538 | 25022.0 |
| omph family outer membrane protein | DDQ68_RS18225 | Not Available | Positive | 4102588 - 4103232 | 22972.5 |
| rlua family pseudouridine synthase | DDQ68_RS18230 | Not Available | Positive | 4103307 - 4104371 | 39364.9 |
| tetratricopeptide repeat protein | DDQ68_RS18235 | Not Available | Negative | 4104439 - 4106085 | 59738.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
