Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yajq family cyclic di-gmp-binding protein | DDQ68_RS18100 | Not Available | Positive | 4077892 - 4078383 | 18053.0 |
| terc family protein | DDQ68_RS18105 | Not Available | Positive | 4078485 - 4079255 | 28069.4 |
| hypothetical protein | DDQ68_RS18110 | Not Available | Negative | 4079316 - 4079735 | 15269.6 |
| rna methyltransferase | DDQ68_RS18115 | Not Available | Negative | 4079932 - 4080465 | 18715.8 |
| dna mismatch repair protein muts | DDQ68_RS18120 | Not Available | Positive | 4080697 - 4083360 | 98096.2 |
| Trna-gly | Not Available | Not Available | Positive | 4083489 - 4083564 | Not Available |
| hnh endonuclease | DDQ68_RS18130 | Not Available | Positive | 4083619 - 4084116 | 18584.2 |
| Trna-leu | Not Available | Not Available | Positive | 4084117 - 4084200 | Not Available |
| hypothetical protein | DDQ68_RS23065 | Not Available | Positive | 4084384 - 4084533 | 5588.91 |
| gaf domain-containing protein | DDQ68_RS18140 | Not Available | Positive | 4084537 - 4084932 | 13908.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
