Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DDQ68_RS18010 | Not Available | Negative | 4057298 - 4059943 | 95646.0 |
| winged helix-turn-helix domain-containing protein | DDQ68_RS18015 | Not Available | Negative | 4060127 - 4060486 | 12812.4 |
| alpha/beta fold hydrolase | DDQ68_RS18020 | Not Available | Negative | 4060543 - 4061229 | 25034.9 |
| nad(p)/fad-dependent oxidoreductase | DDQ68_RS18025 | Not Available | Negative | 4061499 - 4062836 | 47980.9 |
| duf2141 domain-containing protein | DDQ68_RS18030 | Not Available | Positive | 4062940 - 4063392 | 16129.6 |
| hypothetical protein | DDQ68_RS23055 | Not Available | Positive | 4063468 - 4063806 | 11589.3 |
| is5/is1182 family transposase | DDQ68_RS24855 | Not Available | Negative | 4063820 - 4064583 | 27233.9 |
| hypothetical protein | DDQ68_RS24315 | Not Available | Negative | 4064589 - 4064714 | 4339.24 |
| hypothetical protein | DDQ68_RS18045 | Not Available | Negative | 4064823 - 4065047 | 7785.85 |
| aldo/keto reductase | DDQ68_RS18050 | Not Available | Negative | 4065201 - 4066190 | 36245.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
