Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 glutamine amidotransferase domain-containing protein | DDQ68_RS17860 | Not Available | Positive | 4028798 - 4029376 | 20995.1 |
| duf6992 family protein | DDQ68_RS17865 | Not Available | Negative | 4029559 - 4030059 | 17836.0 |
| porin family protein | DDQ68_RS17870 | Not Available | Negative | 4030145 - 4030849 | 24865.4 |
| Trna-val | Not Available | Not Available | Positive | 4031032 - 4031106 | Not Available |
| histone deacetylase | DDQ68_RS17880 | Not Available | Positive | 4031335 - 4032237 | 32656.2 |
| energy transducer tonb | DDQ68_RS17885 | Not Available | Positive | 4032599 - 4033012 | 14180.2 |
| methyltransferase domain-containing protein | DDQ68_RS17890 | Not Available | Negative | 4033042 - 4033746 | 26604.8 |
| type iii polyketide synthase | DDQ68_RS17895 | Not Available | Negative | 4033778 - 4034977 | 42941.6 |
| nad(p)/fad-dependent oxidoreductase | DDQ68_RS17900 | Not Available | Negative | 4035052 - 4036173 | 40030.5 |
| t9ss type a sorting domain-containing protein | DDQ68_RS17905 | Not Available | Positive | 4036363 - 4036755 | 14181.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
