Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 4 protein | DDQ68_RS17660 | Not Available | Positive | 3980147 - 3981268 | 40837.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DDQ68_RS17665 | Not Available | Positive | 3981307 - 3981855 | 19971.8 |
| zinc-dependent metalloprotease | DDQ68_RS17670 | Not Available | Negative | 3981955 - 3984513 | 91908.2 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | DDQ68_RS17675 | Not Available | Negative | 3984658 - 3985980 | 45893.0 |
| t9ss type a sorting domain-containing protein | DDQ68_RS17680 | Not Available | Positive | 3986138 - 3988465 | 81976.0 |
| hypothetical protein | DDQ68_RS17685 | Not Available | Positive | 3988710 - 3989111 | 15212.2 |
| amidohydrolase | DDQ68_RS17690 | Not Available | Negative | 3989211 - 3990002 | 28803.2 |
| tonb-dependent receptor | DDQ68_RS17695 | Not Available | Positive | 3990278 - 3992686 | 86408.3 |
| pepsy-associated tm helix domain-containing protein | DDQ68_RS17700 | Not Available | Positive | 3992946 - 3994088 | 41559.8 |
| methionine aminotransferase | DDQ68_RS17705 | Not Available | Negative | 3994309 - 3995472 | 41517.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
