Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | DDQ68_RS17460 | Not Available | Negative | 3928561 - 3929895 | 48880.4 |
| transketolase family protein | DDQ68_RS17465 | Not Available | Negative | 3930086 - 3931039 | 34274.8 |
| transketolase | DDQ68_RS17470 | Not Available | Negative | 3931205 - 3932062 | 31396.3 |
| cytidylyltransferase domain-containing protein | DDQ68_RS17475 | Not Available | Negative | 3932183 - 3932983 | 29561.1 |
| hypothetical protein | DDQ68_RS17480 | Not Available | Negative | 3932980 - 3934074 | 41299.5 |
| hypothetical protein | DDQ68_RS17485 | Not Available | Positive | 3934377 - 3934661 | 9658.79 |
| nramp family divalent metal transporter | DDQ68_RS17490 | Not Available | Negative | 3934731 - 3935927 | 41533.9 |
| lamb/ycsf family protein | DDQ68_RS17495 | Not Available | Negative | 3935927 - 3936700 | 27105.4 |
| biotin-dependent carboxyltransferase family protein | DDQ68_RS17500 | Not Available | Negative | 3936925 - 3937926 | 34748.0 |
| 5-oxoprolinase subunit pxpb | DDQ68_RS17505 | Not Available | Negative | 3937916 - 3938656 | 26009.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
