Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | DDQ68_RS01685 | Not Available | Negative | 405415 - 406074 | 23278.7 |
| yeee/yede family protein | DDQ68_RS01690 | Not Available | Negative | 406215 - 406781 | 20334.2 |
| rhodanese-like domain-containing protein | DDQ68_RS01695 | Not Available | Negative | 406806 - 407147 | 11991.4 |
| mbl fold metallo-hydrolase | DDQ68_RS01700 | Not Available | Negative | 407308 - 408663 | 47974.2 |
| sulfite exporter taue/safe family protein | DDQ68_RS01705 | Not Available | Negative | 408709 - 409524 | 28215.9 |
| arsr/smtb family transcription factor | DDQ68_RS01710 | Not Available | Negative | 409593 - 409883 | 10591.2 |
| efflux rnd transporter permease subunit | DDQ68_RS23335 | Not Available | Negative | 410192 - 413392 | 113315.0 |
| efflux rnd transporter periplasmic adaptor subunit | DDQ68_RS01720 | Not Available | Negative | 413638 - 414585 | 33980.0 |
| tolc family protein | DDQ68_RS01725 | Not Available | Negative | 414673 - 416010 | 48565.2 |
| response regulator transcription factor | DDQ68_RS01730 | Not Available | Positive | 416202 - 416879 | 25565.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
