Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate-dependent enzyme | DDQ68_RS17220 | Not Available | Positive | 3882146 - 3884188 | 75029.5 |
| is5/is1182 family transposase | DDQ68_RS24840 | Not Available | Negative | 3884185 - 3884589 | 14572.6 |
| hypothetical protein | DDQ68_RS17230 | Not Available | Negative | 3884590 - 3884814 | 8531.14 |
| duf6364 family protein | DDQ68_RS23020 | Not Available | Negative | 3884917 - 3885159 | 8650.1 |
| barstar family protein | DDQ68_RS17235 | Not Available | Negative | 3885330 - 3885494 | 6135.38 |
| m20/m25/m40 family metallo-hydrolase | DDQ68_RS17240 | Not Available | Negative | 3885937 - 3888288 | 82997.0 |
| hypothetical protein | DDQ68_RS17245 | Not Available | Positive | 3888516 - 3888965 | 16355.1 |
| hypothetical protein | DDQ68_RS17250 | Not Available | Positive | 3888922 - 3889275 | 12846.5 |
| bacillithiol system redox-active protein ytxj | DDQ68_RS17255 | Not Available | Positive | 3889401 - 3889748 | 12456.0 |
| osmc family protein | DDQ68_RS17260 | Not Available | Negative | 3889920 - 3890330 | 14498.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
