Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 methylthiotransferase rimo | DDQ68_RS17175 | Not Available | Negative | 3871829 - 3873142 | 49901.6 |
| uma2 family endonuclease | DDQ68_RS17180 | Not Available | Negative | 3873490 - 3874125 | 23385.1 |
| phenylalanine--trna ligase subunit alpha | DDQ68_RS17185 | Not Available | Negative | 3874175 - 3875248 | 39686.5 |
| hypothetical protein | DDQ68_RS17190 | Not Available | Positive | 3875362 - 3875727 | 12290.4 |
| hypothetical protein | DDQ68_RS17195 | Not Available | Positive | 3875934 - 3876326 | 14001.8 |
| hypothetical protein | DDQ68_RS17200 | Not Available | Positive | 3876420 - 3876761 | 12338.0 |
| m16 family metallopeptidase | DDQ68_RS17205 | Not Available | Negative | 3876952 - 3878226 | 47060.7 |
| tonb-dependent receptor domain-containing protein | DDQ68_RS17210 | Not Available | Negative | 3878400 - 3881192 | 100453.0 |
| is1 family transposase | DDQ68_RS17215 | Not Available | Negative | 3881208 - 3881597 | 15097.5 |
| is1 family transposase | DDQ68_RS23015 | Not Available | Negative | 3881617 - 3881931 | 11116.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
