Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1 family transposase | DDQ68_RS17080 | Not Available | Positive | 3854656 - 3855045 | 15097.5 |
| s41 family peptidase | DDQ68_RS17085 | Not Available | Positive | 3855239 - 3856909 | 59249.2 |
| hypothetical protein | DDQ68_RS17090 | Not Available | Positive | 3857044 - 3857598 | 19518.7 |
| hypothetical protein | DDQ68_RS17095 | Not Available | Negative | 3857754 - 3858524 | 27664.3 |
| hydroxymethylglutaryl-coa reductase | DDQ68_RS17100 | Not Available | Negative | 3858747 - 3859814 | 38071.1 |
| duf3891 family protein | DDQ68_RS17105 | Not Available | Positive | 3859819 - 3860436 | 22587.9 |
| hypothetical protein | DDQ68_RS23010 | Not Available | Positive | 3860394 - 3860552 | 5900.19 |
| yihy/virulence factor brkb family protein | DDQ68_RS17110 | Not Available | Positive | 3860644 - 3861612 | 34891.8 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | DDQ68_RS17115 | Not Available | Negative | 3861860 - 3862939 | 40155.1 |
| thioesterase family protein | DDQ68_RS17120 | Not Available | Negative | 3862979 - 3863401 | 15524.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
