Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| patatin-like phospholipase family protein | DDQ68_RS17040 | Not Available | Negative | 3846507 - 3848816 | 85036.4 |
| hypothetical protein | DDQ68_RS17045 | Not Available | Negative | 3848922 - 3849299 | 13139.2 |
| dmt family protein | DDQ68_RS17050 | Not Available | Negative | 3849429 - 3849671 | 9172.52 |
| hypothetical protein | DDQ68_RS24465 | Not Available | Negative | 3849689 - 3849751 | 2494.06 |
| ion channel | DDQ68_RS17055 | Not Available | Positive | 3849948 - 3850856 | 33112.7 |
| zinc dependent phospholipase c family protein | DDQ68_RS17060 | Not Available | Negative | 3850944 - 3851936 | 36655.6 |
| is5 family transposase | DDQ68_RS17065 | Not Available | Negative | 3851960 - 3852790 | 31636.0 |
| peptide deformylase | DDQ68_RS17070 | Not Available | Negative | 3853000 - 3853596 | 22026.7 |
| holliday junction resolvase ruvx | DDQ68_RS17075 | Not Available | Negative | 3853657 - 3854085 | 15444.9 |
| is1 family transposase | DDQ68_RS23005 | Not Available | Positive | 3854322 - 3854636 | 11116.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
