Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eco57i restriction-modification methylase domain-containing protein | DDQ68_RS01635 | Not Available | Positive | 392456 - 396289 | 144139.0 |
| helix-turn-helix domain-containing protein | DDQ68_RS01640 | Not Available | Positive | 396385 - 396933 | 19407.4 |
| hypothetical protein | DDQ68_RS01645 | Not Available | Positive | 397213 - 397632 | 14838.4 |
| transposase | DDQ68_RS01650 | Not Available | Negative | 397812 - 398384 | 21993.4 |
| metal-dependent hydrolase family protein | DDQ68_RS01655 | Not Available | Positive | 398664 - 399926 | 44241.4 |
| phosphatase pap2 family protein | DDQ68_RS01660 | Not Available | Positive | 400492 - 401346 | 30816.2 |
| ynce family protein | DDQ68_RS01665 | Not Available | Positive | 401434 - 402450 | 35053.7 |
| dsre family protein | DDQ68_RS01670 | Not Available | Negative | 402899 - 403525 | 21442.9 |
| c-type cytochrome | DDQ68_RS01675 | Not Available | Negative | 403925 - 404971 | 37651.0 |
| duf6691 family protein | DDQ68_RS01680 | Not Available | Negative | 405008 - 405418 | 14773.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
