Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m13 family metallopeptidase | DDQ68_RS16450 | Not Available | Positive | 3710909 - 3713014 | 77023.5 |
| methylated-dna--[protein]-cysteine s-methyltransferase | DDQ68_RS16455 | Not Available | Negative | 3713200 - 3713700 | 17027.5 |
| amine oxidase | DDQ68_RS16460 | Not Available | Negative | 3713769 - 3714959 | 45081.5 |
| cation diffusion facilitator family transporter | DDQ68_RS16465 | Not Available | Negative | 3715072 - 3716001 | 33153.2 |
| apc family permease | DDQ68_RS16470 | Not Available | Positive | 3716142 - 3717545 | 50528.5 |
| is630 family transposase | DDQ68_RS16475 | Not Available | Negative | 3717555 - 3718253 | 26759.8 |
| helix-turn-helix domain-containing protein | DDQ68_RS16480 | Not Available | Negative | 3718259 - 3718702 | 15583.1 |
| hypothetical protein | DDQ68_RS16485 | Not Available | Positive | 3718792 - 3719367 | 21717.3 |
| gnat family n-acetyltransferase | DDQ68_RS16490 | Not Available | Negative | 3719364 - 3719879 | 18914.6 |
| porphobilinogen synthase | DDQ68_RS16495 | Not Available | Negative | 3719881 - 3720873 | 36700.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
