Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | DDQ68_RS01580 | Not Available | Negative | 380872 - 382224 | 48737.0 |
| hyc_cc_pp family protein | DDQ68_RS01585 | Not Available | Negative | 382370 - 382756 | 13625.1 |
| hypothetical protein | DDQ68_RS01590 | Not Available | Negative | 383229 - 383417 | 6987.41 |
| transposase | DDQ68_RS01600 | Not Available | Negative | 383909 - 384268 | 12978.2 |
| hypothetical protein | DDQ68_RS24540 | Not Available | Negative | 384596 - 384787 | 6733.99 |
| mbnp family protein | DDQ68_RS01610 | Not Available | Positive | 385036 - 385800 | 26697.6 |
| cytochrome-c peroxidase | DDQ68_RS01615 | Not Available | Positive | 385914 - 387065 | 41078.8 |
| n-acetylglucosamine-6-phosphate deacetylase | DDQ68_RS01620 | Not Available | Negative | 387181 - 388302 | 38962.0 |
| class ii fructose-bisphosphate aldolase | DDQ68_RS01625 | Not Available | Positive | 388614 - 389699 | 39608.8 |
| penicillin acylase family protein | DDQ68_RS01630 | Not Available | Positive | 389902 - 392124 | 81815.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
