Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane beta-barrel protein | DDQ68_RS16400 | Not Available | Negative | 3700755 - 3701495 | 26270.4 |
| tetratricopeptide repeat protein | DDQ68_RS16405 | Not Available | Negative | 3701599 - 3702342 | 26242.2 |
| alpha/beta hydrolase | DDQ68_RS16410 | Not Available | Positive | 3702483 - 3703367 | 31806.6 |
| hypothetical protein | DDQ68_RS16415 | Not Available | Positive | 3703417 - 3703701 | 10567.6 |
| dinb family protein | DDQ68_RS16420 | Not Available | Negative | 3703741 - 3704274 | 18542.4 |
| diaminopimelate decarboxylase | DDQ68_RS16425 | Not Available | Positive | 3704446 - 3705651 | 44559.1 |
| chorismate mutase | DDQ68_RS23995 | Not Available | Negative | 3705853 - 3706923 | 39766.0 |
| prephenate dehydrogenase | DDQ68_RS24000 | Not Available | Negative | 3707020 - 3707865 | 30437.9 |
| pyridoxal phosphate-dependent aminotransferase | DDQ68_RS16440 | Not Available | Negative | 3708048 - 3709259 | 42682.7 |
| prephenate dehydratase | DDQ68_RS16445 | Not Available | Negative | 3709598 - 3710467 | 31063.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
