Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase | DDQ68_RS16350 | Not Available | Negative | 3691242 - 3691916 | 25422.1 |
| transposase | DDQ68_RS24820 | Not Available | Positive | 3692704 - 3692916 | 7517.87 |
| is3 family transposase | DDQ68_RS16360 | Not Available | Positive | 3693025 - 3693477 | 16447.8 |
| integrase core domain-containing protein | DDQ68_RS16365 | Not Available | Positive | 3693532 - 3693921 | 14339.9 |
| hypothetical protein | DDQ68_RS22985 | Not Available | Negative | 3693989 - 3694138 | 5583.6 |
| hydroxymethylglutaryl-coa reductase | DDQ68_RS16370 | Not Available | Negative | 3694494 - 3696038 | 55273.7 |
| energy transducer tonb | DDQ68_RS22990 | Not Available | Negative | 3696129 - 3696968 | 30156.7 |
| phytanoyl-coa dioxygenase family protein | DDQ68_RS16385 | Not Available | Positive | 3697372 - 3698187 | 30882.0 |
| phosphatase pap2-related protein | DDQ68_RS16390 | Not Available | Negative | 3698342 - 3699019 | 24602.5 |
| amidohydrolase | DDQ68_RS16395 | Not Available | Positive | 3699143 - 3700477 | 46206.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
