Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DDQ68_RS16015 | Not Available | Negative | 3604876 - 3605136 | 9742.11 |
| flippase | DDQ68_RS16020 | Not Available | Positive | 3605528 - 3606886 | 49952.6 |
| glycosyltransferase family 2 protein | DDQ68_RS16025 | Not Available | Positive | 3606889 - 3607797 | 33812.3 |
| ompa family protein | DDQ68_RS16030 | Not Available | Negative | 3607961 - 3609172 | 42135.0 |
| hypothetical protein | DDQ68_RS22960 | Not Available | Negative | 3609504 - 3610055 | 18846.7 |
| polysaccharide biosynthesis/export family protein | DDQ68_RS16040 | Not Available | Positive | 3610480 - 3611211 | 26452.2 |
| polysaccharide biosynthesis tyrosine autokinase | DDQ68_RS16045 | Not Available | Positive | 3611261 - 3613648 | 87627.7 |
| lipopolysaccharide biosynthesis protein | DDQ68_RS16050 | Not Available | Positive | 3613752 - 3615332 | 55938.0 |
| glycosyltransferase family 4 protein | DDQ68_RS16055 | Not Available | Positive | 3615329 - 3616546 | 43712.2 |
| o-antigen ligase family protein | DDQ68_RS16060 | Not Available | Positive | 3616577 - 3617872 | 48463.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
