Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdh family clp fold serine proteinase | DDQ68_RS15965 | Not Available | Negative | 3594990 - 3595880 | 33986.9 |
| duf433 domain-containing protein | DDQ68_RS15970 | Not Available | Positive | 3596088 - 3596444 | 12962.6 |
| duf433 domain-containing protein | DDQ68_RS15975 | Not Available | Negative | 3596449 - 3596643 | 6982.6 |
| duf5694 domain-containing protein | DDQ68_RS15980 | Not Available | Positive | 3596839 - 3597705 | 31327.7 |
| rhodanese-like domain-containing protein | DDQ68_RS15985 | Not Available | Positive | 3597907 - 3598323 | 14390.2 |
| gnat family n-acetyltransferase | DDQ68_RS15990 | Not Available | Positive | 3598772 - 3599341 | 19503.5 |
| bestrophin family protein | DDQ68_RS15995 | Not Available | Positive | 3599442 - 3600362 | 34043.7 |
| amidohydrolase family protein | DDQ68_RS16000 | Not Available | Positive | 3600410 - 3601849 | 50778.3 |
| fatty acid desaturase family protein | DDQ68_RS16005 | Not Available | Negative | 3601936 - 3603000 | 40331.0 |
| tpm domain-containing protein | DDQ68_RS16010 | Not Available | Positive | 3603304 - 3604635 | 43734.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
