Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is630 family transposase | DDQ68_RS01530 | Not Available | Positive | 371105 - 371812 | 26700.2 |
| integrase core domain-containing protein | DDQ68_RS01535 | Not Available | Negative | 371946 - 372245 | 11485.4 |
| is5/is1182 family transposase | DDQ68_RS24535 | Not Available | Negative | 372301 - 372849 | 21199.7 |
| transposase | DDQ68_RS01545 | Not Available | Negative | 372846 - 373154 | 11199.3 |
| heavy metal-binding domain-containing protein | DDQ68_RS01550 | Not Available | Negative | 373389 - 373631 | 8357.94 |
| transposase | DDQ68_RS01555 | Not Available | Negative | 373679 - 374698 | 39206.2 |
| efflux rnd transporter periplasmic adaptor subunit | DDQ68_RS01560 | Not Available | Negative | 374773 - 376239 | 52278.1 |
| efflux rnd transporter periplasmic adaptor subunit | DDQ68_RS01565 | Not Available | Negative | 376232 - 377629 | 49064.6 |
| tolc family protein | DDQ68_RS01570 | Not Available | Negative | 377607 - 378818 | 45479.3 |
| efflux rnd transporter permease subunit | DDQ68_RS01575 | Not Available | Negative | 378885 - 380777 | 69073.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
