Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l27 | DDQ68_RS15920 | Not Available | Negative | 3587601 - 3587876 | 9560.51 |
| 50s ribosomal protein l21 | DDQ68_RS15925 | Not Available | Negative | 3587976 - 3588281 | 10998.5 |
| ribonucleoside-diphosphate reductase small subunit | DDQ68_RS15930 | Not Available | Positive | 3588812 - 3589771 | 36700.8 |
| duf1348 family protein | DDQ68_RS15935 | Not Available | Negative | 3590383 - 3590712 | 12943.1 |
| hypothetical protein | DDQ68_RS15940 | Not Available | Positive | 3590798 - 3591013 | 7493.47 |
| ribonucleoside-diphosphate reductase subunit alpha | DDQ68_RS15945 | Not Available | Positive | 3591266 - 3593647 | 89349.7 |
| hypothetical protein | DDQ68_RS15950 | Not Available | Positive | 3593696 - 3593956 | 9797.93 |
| type ii toxin-antitoxin system hicb family antitoxin | DDQ68_RS15955 | Not Available | Negative | 3594018 - 3594371 | 13024.6 |
| hypothetical protein | DDQ68_RS15960 | Not Available | Positive | 3594475 - 3594645 | 6161.11 |
| hypothetical protein | DDQ68_RS22955 | Not Available | Negative | 3594745 - 3594945 | 7629.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
