Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen/starch synthase | DDQ68_RS15665 | Not Available | Positive | 3540384 - 3541196 | 30827.9 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | DDQ68_RS15670 | Not Available | Positive | 3541549 - 3543387 | 67717.5 |
| rida family protein | DDQ68_RS15675 | Not Available | Positive | 3543517 - 3543900 | 13256.9 |
| hypothetical protein | DDQ68_RS15680 | Not Available | Positive | 3544466 - 3544786 | 11978.4 |
| integrase core domain-containing protein | DDQ68_RS15685 | Not Available | Positive | 3544924 - 3545160 | 9288.92 |
| hypothetical protein | DDQ68_RS15690 | Not Available | Negative | 3545455 - 3545943 | 17219.0 |
| lysophospholipid acyltransferase family protein | DDQ68_RS15695 | Not Available | Positive | 3546171 - 3547556 | 50642.5 |
| chromate efflux transporter | DDQ68_RS15700 | Not Available | Negative | 3547808 - 3549058 | 44831.2 |
| isopenicillin n synthase family dioxygenase | DDQ68_RS15705 | Not Available | Negative | 3549209 - 3550186 | 36304.1 |
| hypothetical protein | DDQ68_RS15710 | Not Available | Positive | 3550413 - 3551285 | 31324.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
