Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4142 domain-containing protein | DDQ68_RS15565 | Not Available | Negative | 3521553 - 3522146 | 20817.1 |
| duf4142 domain-containing protein | DDQ68_RS15570 | Not Available | Negative | 3522238 - 3522828 | 21051.3 |
| enoyl-coa hydratase-related protein | DDQ68_RS15575 | Not Available | Negative | 3522908 - 3523708 | 28359.0 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | DDQ68_RS15580 | Not Available | Negative | 3523834 - 3524550 | 25299.8 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | DDQ68_RS15585 | Not Available | Negative | 3524925 - 3525974 | 39641.8 |
| abc transporter permease | DDQ68_RS15590 | Not Available | Positive | 3526270 - 3527529 | 45372.8 |
| d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase | DDQ68_RS15595 | Not Available | Positive | 3527668 - 3528147 | 17148.8 |
| zinc metallopeptidase | DDQ68_RS15600 | Not Available | Positive | 3528225 - 3528893 | 24599.4 |
| hypothetical protein | DDQ68_RS15605 | Not Available | Positive | 3528998 - 3529291 | 9770.83 |
| luxr c-terminal-related transcriptional regulator | DDQ68_RS15610 | Not Available | Positive | 3529446 - 3530069 | 21809.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
