Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family membrane protein | DDQ68_RS15510 | Not Available | Negative | 3504910 - 3505263 | 12606.0 |
| atp-binding protein | DDQ68_RS15515 | Not Available | Negative | 3505295 - 3508060 | 98286.7 |
| rna polymerase factor sigma-54 | DDQ68_RS15520 | Not Available | Negative | 3508130 - 3509713 | 58856.9 |
| asparagine--trna ligase | DDQ68_RS15525 | Not Available | Positive | 3509842 - 3511236 | 52542.4 |
| fad-dependent oxidoreductase | DDQ68_RS15530 | Not Available | Positive | 3511444 - 3513072 | 57791.9 |
| hypothetical protein | DDQ68_RS15535 | Not Available | Negative | 3513153 - 3513707 | 20760.2 |
| hypothetical protein | DDQ68_RS15545 | Not Available | Negative | 3514377 - 3515363 | 34543.9 |
| excinuclease abc subunit uvra | DDQ68_RS15550 | Not Available | Positive | 3515647 - 3518718 | 112669.0 |
| transposase | DDQ68_RS15555 | Not Available | Negative | 3519422 - 3520534 | 41807.3 |
| tmem175 family protein | DDQ68_RS15560 | Not Available | Negative | 3520731 - 3521444 | 27188.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
