Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trar/dksa family transcriptional regulator | DDQ68_RS15460 | Not Available | Positive | 3491493 - 3491876 | 14413.0 |
| pseudouridine synthase | DDQ68_RS24300 | Not Available | Positive | 3492059 - 3494173 | 76764.3 |
| type iii pantothenate kinase | DDQ68_RS15470 | Not Available | Positive | 3494255 - 3494995 | 25453.3 |
| outer membrane protein transport protein | DDQ68_RS15475 | Not Available | Positive | 3494982 - 3496307 | 47444.1 |
| lps export abc transporter periplasmic protein lptc | DDQ68_RS15480 | Not Available | Positive | 3496310 - 3496900 | 21833.1 |
| hypothetical protein | DDQ68_RS15485 | Not Available | Positive | 3496916 - 3497200 | 10364.9 |
| peptidylprolyl isomerase | DDQ68_RS15490 | Not Available | Positive | 3497352 - 3499466 | 75867.0 |
| tetratricopeptide repeat protein | DDQ68_RS15495 | Not Available | Positive | 3499972 - 3501798 | 67433.5 |
| single-stranded-dna-specific exonuclease recj | DDQ68_RS15500 | Not Available | Positive | 3502216 - 3503955 | 62193.9 |
| bluf domain-containing protein | DDQ68_RS15505 | Not Available | Negative | 3503965 - 3504417 | 16516.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
