Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DDQ68_RS01480 | Not Available | Negative | 364446 - 364970 | 19173.5 |
| lysm peptidoglycan-binding domain-containing protein | DDQ68_RS01485 | Not Available | Negative | 365001 - 365948 | 32438.1 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | DDQ68_RS01490 | Not Available | Positive | 366138 - 366893 | 27829.3 |
| duf1622 domain-containing protein | DDQ68_RS01495 | Not Available | Negative | 366913 - 367314 | 14942.4 |
| hypothetical protein | DDQ68_RS01500 | Not Available | Negative | 367349 - 367933 | 22388.7 |
| translation initiation factor | DDQ68_RS01505 | Not Available | Negative | 367933 - 368274 | 12090.5 |
| diacylglycerol/lipid kinase family protein | DDQ68_RS01510 | Not Available | Negative | 368320 - 369195 | 30719.0 |
| type i glyceraldehyde-3-phosphate dehydrogenase | DDQ68_RS01515 | Not Available | Negative | 369293 - 370300 | 35674.7 |
| Trna-glu | Not Available | Not Available | Positive | 370567 - 370638 | Not Available |
| helix-turn-helix domain-containing protein | DDQ68_RS24530 | Not Available | Positive | 370879 - 371124 | 8767.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
