Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin family protein | DDQ68_RS15360 | Not Available | Negative | 3467444 - 3468049 | 21372.4 |
| glycine--trna ligase | DDQ68_RS15365 | Not Available | Positive | 3468330 - 3469841 | 56795.4 |
| duf433 domain-containing protein | DDQ68_RS15370 | Not Available | Positive | 3469898 - 3470146 | 9306.01 |
| duf5615 family pin-like protein | DDQ68_RS15375 | Not Available | Positive | 3470234 - 3470572 | 13004.4 |
| efflux rnd transporter permease subunit | DDQ68_RS15380 | Not Available | Positive | 3470629 - 3473067 | 90056.0 |
| isoleucine--trna ligase | DDQ68_RS15385 | Not Available | Positive | 3473315 - 3476818 | 131647.0 |
| lipoprotein signal peptidase | DDQ68_RS15390 | Not Available | Positive | 3476986 - 3477642 | 23967.5 |
| abc transporter atp-binding protein | DDQ68_RS23525 | Not Available | Positive | 3477745 - 3479667 | 69393.5 |
| ribonuclease r | DDQ68_RS15400 | Not Available | Positive | 3480034 - 3482514 | 93124.5 |
| polyprenyl synthetase family protein | DDQ68_RS15405 | Not Available | Positive | 3482713 - 3483684 | 35562.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
