Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DDQ68_RS15215 | Not Available | Positive | 3428769 - 3429038 | 9747.81 |
| efflux rnd transporter periplasmic adaptor subunit | DDQ68_RS15220 | Not Available | Positive | 3429077 - 3430234 | 41700.0 |
| efflux rnd transporter permease subunit | DDQ68_RS15225 | Not Available | Positive | 3430427 - 3433618 | 114569.0 |
| efflux transporter outer membrane subunit | DDQ68_RS15230 | Not Available | Positive | 3433829 - 3435274 | 52381.6 |
| thioredoxin family protein | DDQ68_RS15235 | Not Available | Positive | 3435371 - 3435982 | 22101.5 |
| duf4382 domain-containing protein | DDQ68_RS15240 | Not Available | Negative | 3436101 - 3436949 | 30085.8 |
| asma-like c-terminal region-containing protein | DDQ68_RS15245 | Not Available | Negative | 3437097 - 3440117 | 107943.0 |
| carbohydrate-binding protein | DDQ68_RS15250 | Not Available | Negative | 3440351 - 3442042 | 60646.2 |
| porp/sprf family type ix secretion system membrane protein | DDQ68_RS15255 | Not Available | Positive | 3442966 - 3444015 | 37209.2 |
| gliding motility lipoprotein gldj | DDQ68_RS15260 | Not Available | Positive | 3444097 - 3445341 | 46060.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
