Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline--trna ligase | DDQ68_RS14915 | Not Available | Negative | 3359059 - 3360534 | 55566.3 |
| hypothetical protein | DDQ68_RS22940 | Not Available | Positive | 3360806 - 3362302 | 50054.9 |
| ompp1/fadl family transporter | DDQ68_RS14925 | Not Available | Positive | 3362473 - 3363993 | 54280.9 |
| glutathione-independent formaldehyde dehydrogenase | DDQ68_RS14935 | Not Available | Negative | 3364398 - 3365555 | 41563.6 |
| is5/is1182 family transposase | DDQ68_RS24805 | Not Available | Positive | 3365704 - 3365877 | 6751.22 |
| hypothetical protein | DDQ68_RS23970 | Not Available | Positive | 3365999 - 3366631 | 23486.2 |
| hypothetical protein | DDQ68_RS24810 | Not Available | Positive | 3366531 - 3366848 | 11604.5 |
| hypothetical protein | DDQ68_RS14950 | Not Available | Negative | 3366881 - 3367051 | 6307.5 |
| hypothetical protein | DDQ68_RS14955 | Not Available | Negative | 3367181 - 3368203 | 35815.1 |
| duf3365 domain-containing protein | DDQ68_RS14960 | Not Available | Positive | 3368288 - 3369001 | 26596.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
