Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t9ss type a sorting domain-containing protein | DDQ68_RS14715 | Not Available | Positive | 3319610 - 3320104 | 16568.4 |
| voc family protein | DDQ68_RS14720 | Not Available | Negative | 3320101 - 3320499 | 14666.4 |
| abc transporter atp-binding protein | DDQ68_RS14725 | Not Available | Negative | 3320513 - 3322297 | 66804.3 |
| transcription antitermination factor nusb | DDQ68_RS23955 | Not Available | Positive | 3322580 - 3323881 | 48500.1 |
| ytxh domain-containing protein | DDQ68_RS14735 | Not Available | Positive | 3323963 - 3324271 | 10828.0 |
| isocitrate/isopropylmalate dehydrogenase family protein | DDQ68_RS14740 | Not Available | Positive | 3324425 - 3325423 | 36032.5 |
| duf1573 domain-containing protein | DDQ68_RS14745 | Not Available | Positive | 3325527 - 3326036 | 17446.6 |
| preprotein translocase subunit yajc | DDQ68_RS14750 | Not Available | Positive | 3326059 - 3326373 | 11409.1 |
| hypothetical protein | DDQ68_RS14755 | Not Available | Positive | 3326377 - 3327087 | 26023.4 |
| dephospho-coa kinase | DDQ68_RS14760 | Not Available | Positive | 3327301 - 3327915 | 22257.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
