Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | DDQ68_RS14625 | Not Available | Positive | 3297783 - 3298628 | 31867.3 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 3298768 - 3298879 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 3298961 - 3301887 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3302133 - 3303648 | Not Available |
| hypothetical protein | DDQ68_RS22930 | Not Available | Negative | 3304722 - 3304898 | 6606.04 |
| twin-arginine translocase subunit tatc | DDQ68_RS14645 | Not Available | Negative | 3305341 - 3306240 | 33441.3 |
| serine hydroxymethyltransferase | DDQ68_RS14650 | Not Available | Negative | 3306334 - 3307626 | 46400.3 |
| hypothetical protein | DDQ68_RS14655 | Not Available | Positive | 3307790 - 3309058 | 47227.3 |
| hypothetical protein | DDQ68_RS22935 | Not Available | Positive | 3309012 - 3309248 | 8583.35 |
| dinb family protein | DDQ68_RS14660 | Not Available | Negative | 3309336 - 3309818 | 18504.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
