Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sumf1/egtb/pvdo family nonheme iron enzyme | DDQ68_RS14090 | Not Available | Negative | 3185962 - 3186981 | 38362.7 |
| porp/sprf family type ix secretion system membrane protein | DDQ68_RS14095 | Not Available | Negative | 3187223 - 3188218 | 35616.2 |
| uroporphyrinogen-iii synthase | DDQ68_RS14100 | Not Available | Negative | 3188421 - 3189209 | 29680.6 |
| duf4271 domain-containing protein | DDQ68_RS14105 | Not Available | Negative | 3189291 - 3190499 | 43474.2 |
| mray family glycosyltransferase | DDQ68_RS14110 | Not Available | Negative | 3190526 - 3191596 | 38103.0 |
| hypothetical protein | DDQ68_RS14115 | Not Available | Negative | 3191645 - 3192067 | 15610.5 |
| lipoyl(octanoyl) transferase lipb | DDQ68_RS14120 | Not Available | Negative | 3192148 - 3192900 | 27140.8 |
| yran family protein | DDQ68_RS22915 | Not Available | Positive | 3193064 - 3193423 | 13284.8 |
| toxin-antitoxin system ywqk family antitoxin | DDQ68_RS14130 | Not Available | Negative | 3193441 - 3194448 | 38101.4 |
| cyanophycinase | DDQ68_RS14135 | Not Available | Negative | 3194514 - 3195323 | 28085.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
