Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f0 subunit c | DDQ68_RS14040 | Not Available | Negative | 3172160 - 3172420 | 8381.86 |
| f0f1 atp synthase subunit a | DDQ68_RS14045 | Not Available | Negative | 3172505 - 3173578 | 39500.4 |
| hypothetical protein | DDQ68_RS14050 | Not Available | Negative | 3173615 - 3174022 | 14439.9 |
| atpz/atpi family protein | DDQ68_RS14055 | Not Available | Negative | 3174036 - 3174287 | 8869.73 |
| tetratricopeptide repeat protein | DDQ68_RS14060 | Not Available | Positive | 3174471 - 3177635 | 114342.0 |
| penicillin-binding protein 1a | DDQ68_RS14065 | Not Available | Positive | 3177732 - 3180080 | 87251.5 |
| excinuclease abc subunit uvrc | DDQ68_RS14070 | Not Available | Positive | 3180498 - 3182309 | 68776.4 |
| gliding motility protein gldn | DDQ68_RS14075 | Not Available | Negative | 3182406 - 3183392 | 36157.7 |
| gliding motility protein gldm | DDQ68_RS14080 | Not Available | Negative | 3183455 - 3185041 | 56473.8 |
| gliding motility protein gldl | DDQ68_RS14085 | Not Available | Negative | 3185097 - 3185903 | 29152.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
