Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5686 and carboxypeptidase regulatory-like domain-containing protein | DDQ68_RS13945 | Not Available | Negative | 3149578 - 3152217 | 97574.4 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | DDQ68_RS13950 | Not Available | Positive | 3152344 - 3152826 | 17606.3 |
| m28 family peptidase | DDQ68_RS13955 | Not Available | Positive | 3153020 - 3154672 | 59248.1 |
| m28 family peptidase | DDQ68_RS13960 | Not Available | Positive | 3154698 - 3156392 | 60646.6 |
| lactate utilization protein b | DDQ68_RS13965 | Not Available | Positive | 3156462 - 3157841 | 50568.7 |
| hypothetical protein | DDQ68_RS13970 | Not Available | Positive | 3157891 - 3158955 | 39068.9 |
| l-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha | DDQ68_RS13975 | Not Available | Negative | 3158972 - 3159874 | 31095.7 |
| peptide-methionine (r)-s-oxide reductase msrb | DDQ68_RS13980 | Not Available | Negative | 3159979 - 3160446 | 17176.1 |
| rbbp9/yden family alpha/beta hydrolase | DDQ68_RS13985 | Not Available | Negative | 3160538 - 3161077 | 19321.8 |
| nad(p)h-hydrate dehydratase | DDQ68_RS13990 | Not Available | Positive | 3161121 - 3162629 | 52281.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
