Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | DDQ68_RS13895 | Not Available | Positive | 3140581 - 3144021 | 123688.0 |
| acyl carrier protein | DDQ68_RS13900 | Not Available | Positive | 3144173 - 3144436 | 9865.97 |
| ykva family protein | DDQ68_RS13905 | Not Available | Negative | 3144535 - 3145158 | 22126.4 |
| c40 family peptidase | DDQ68_RS13910 | Not Available | Negative | 3145316 - 3146014 | 24580.2 |
| duf4157 domain-containing protein | DDQ68_RS13915 | Not Available | Positive | 3146343 - 3146684 | 12633.2 |
| sdr family nad(p)-dependent oxidoreductase | DDQ68_RS13920 | Not Available | Negative | 3146771 - 3147502 | 25529.9 |
| hypothetical protein | DDQ68_RS13925 | Not Available | Positive | 3147684 - 3148055 | 13109.5 |
| Trna-thr | Not Available | Not Available | Positive | 3148129 - 3148201 | Not Available |
| hypothetical protein | DDQ68_RS13935 | Not Available | Negative | 3148299 - 3148925 | 23282.3 |
| hypothetical protein | DDQ68_RS13940 | Not Available | Positive | 3149052 - 3149351 | 10806.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
