Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr03643 family protein | DDQ68_RS13845 | Not Available | Negative | 3128845 - 3129129 | 10954.2 |
| glycosyltransferase family 2 protein | DDQ68_RS13850 | Not Available | Negative | 3129214 - 3130296 | 39021.0 |
| hypothetical protein | DDQ68_RS13855 | Not Available | Positive | 3130580 - 3133216 | 93759.5 |
| 1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase | DDQ68_RS13860 | Not Available | Positive | 3133408 - 3134319 | 32050.7 |
| hypothetical protein | DDQ68_RS13865 | Not Available | Negative | 3134386 - 3135555 | 42576.8 |
| duf4230 domain-containing protein | DDQ68_RS13870 | Not Available | Positive | 3135610 - 3136245 | 23695.1 |
| regulatory protein recx | DDQ68_RS13875 | Not Available | Negative | 3136332 - 3136838 | 19760.5 |
| tetr/acrr family transcriptional regulator | DDQ68_RS13880 | Not Available | Positive | 3137032 - 3137646 | 23262.0 |
| tolc family protein | DDQ68_RS13885 | Not Available | Positive | 3137687 - 3139357 | 59294.6 |
| efflux rnd transporter periplasmic adaptor subunit | DDQ68_RS13890 | Not Available | Positive | 3139418 - 3140557 | 40221.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
