Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase-like regulatory domain-containing protein | DDQ68_RS13795 | Not Available | Positive | 3114845 - 3115741 | 33028.8 |
| alpha/beta hydrolase family protein | DDQ68_RS13800 | Not Available | Negative | 3116006 - 3117388 | 47836.3 |
| ompa family protein | DDQ68_RS13805 | Not Available | Negative | 3117627 - 3118277 | 22682.9 |
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | DDQ68_RS13810 | Not Available | Negative | 3118331 - 3120952 | 93739.3 |
| duf5602 domain-containing protein | DDQ68_RS13815 | Not Available | Negative | 3121228 - 3121977 | 27185.3 |
| hydrogen peroxide-inducible genes activator | DDQ68_RS13820 | Not Available | Positive | 3122428 - 3123357 | 34682.4 |
| serine hydrolase domain-containing protein | DDQ68_RS13825 | Not Available | Negative | 3123488 - 3124585 | 40068.5 |
| arnt family glycosyltransferase | DDQ68_RS13830 | Not Available | Positive | 3124801 - 3126465 | 63471.9 |
| lysylphosphatidylglycerol synthase transmembrane domain-containing protein | DDQ68_RS13835 | Not Available | Positive | 3126599 - 3127474 | 31152.8 |
| carbohydrate deacetylase | DDQ68_RS13840 | Not Available | Negative | 3127808 - 3128608 | 29456.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
