Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4292 domain-containing protein | DDQ68_RS13640 | Not Available | Negative | 3078330 - 3079124 | 27455.1 |
| tetratricopeptide repeat protein | DDQ68_RS13645 | Not Available | Negative | 3079117 - 3080943 | 67203.5 |
| sugar phosphate nucleotidyltransferase | DDQ68_RS13650 | Not Available | Negative | 3081079 - 3082089 | 36700.1 |
| threonine/serine dehydratase | DDQ68_RS13655 | Not Available | Negative | 3082157 - 3083131 | 34251.7 |
| dutp diphosphatase | DDQ68_RS13660 | Not Available | Negative | 3083309 - 3083743 | 15178.2 |
| site-specific dna-methyltransferase | DDQ68_RS23500 | Not Available | Negative | 3083849 - 3085546 | 62930.9 |
| hypothetical protein | DDQ68_RS13675 | Not Available | Negative | 3086019 - 3086498 | 16356.6 |
| lipopolysaccharide biosynthesis protein | DDQ68_RS13680 | Not Available | Negative | 3086701 - 3088197 | 54932.5 |
| enoyl-coa hydratase/isomerase family protein | DDQ68_RS13685 | Not Available | Negative | 3088448 - 3089239 | 27384.1 |
| large conductance mechanosensitive channel protein mscl | DDQ68_RS13690 | Not Available | Positive | 3089415 - 3089792 | 12966.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
