Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration protein ruva | DDQ68_RS13590 | Not Available | Negative | 3064404 - 3065009 | 21731.6 |
| duf885 domain-containing protein | DDQ68_RS13595 | Not Available | Negative | 3065639 - 3067450 | 67757.6 |
| nadp-dependent malic enzyme | DDQ68_RS13600 | Not Available | Negative | 3067526 - 3069796 | 81817.4 |
| mrr restriction system protein | DDQ68_RS13605 | Not Available | Positive | 3069839 - 3070771 | 34737.4 |
| lysm peptidoglycan-binding domain-containing protein | DDQ68_RS13610 | Not Available | Negative | 3070773 - 3072932 | 78350.7 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | DDQ68_RS13615 | Not Available | Negative | 3073060 - 3074490 | 51259.9 |
| twin-arginine translocase tata/tate family subunit | DDQ68_RS24440 | Not Available | Negative | 3074517 - 3074963 | 16074.9 |
| is5/is1182 family transposase | DDQ68_RS23940 | Not Available | Negative | 3075331 - 3075486 | 5675.23 |
| lytr/algr family response regulator transcription factor | DDQ68_RS13630 | Not Available | Positive | 3075742 - 3076605 | 30408.7 |
| murein hydrolase activator envc family protein | DDQ68_RS13635 | Not Available | Negative | 3076845 - 3078254 | 52284.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
