Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated c-terminal domain-containing protein | DDQ68_RS13540 | Not Available | Positive | 3044020 - 3044259 | 9139.75 |
| pepsy-associated tm helix domain-containing protein | DDQ68_RS13545 | Not Available | Negative | 3044496 - 3045800 | 46255.0 |
| tonb-dependent siderophore receptor | DDQ68_RS13550 | Not Available | Negative | 3045904 - 3048384 | 88471.5 |
| glycosyltransferase | DDQ68_RS13555 | Not Available | Negative | 3048664 - 3049863 | 43121.3 |
| tonb-dependent receptor | DDQ68_RS13560 | Not Available | Negative | 3050007 - 3053432 | 123672.0 |
| yicc/yloc family endoribonuclease | DDQ68_RS13565 | Not Available | Positive | 3053652 - 3054551 | 33072.8 |
| hypothetical protein | DDQ68_RS13570 | Not Available | Positive | 3054903 - 3055451 | 20797.1 |
| vanz family protein | DDQ68_RS13575 | Not Available | Negative | 3055636 - 3056052 | 15008.7 |
| glycine cleavage system protein gcvh | DDQ68_RS13580 | Not Available | Negative | 3056077 - 3056457 | 13567.9 |
| cell surface protein spra | DDQ68_RS13585 | Not Available | Negative | 3056635 - 3064203 | 278608.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
