Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor domain-containing protein | DDQ68_RS13445 | Not Available | Positive | 3016658 - 3019666 | 103886.0 |
| lysylphosphatidylglycerol synthase transmembrane domain-containing protein | DDQ68_RS13450 | Not Available | Positive | 3019813 - 3020928 | 40635.5 |
| erythromycin esterase family protein | DDQ68_RS13455 | Not Available | Negative | 3020915 - 3023527 | 92909.4 |
| hypothetical protein | DDQ68_RS13460 | Not Available | Negative | 3023670 - 3024089 | 14946.9 |
| lysm peptidoglycan-binding domain-containing protein | DDQ68_RS13465 | Not Available | Positive | 3024291 - 3024557 | 9255.76 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein | DDQ68_RS13470 | Not Available | Positive | 3025175 - 3026557 | 49234.3 |
| homoserine o-acetyltransferase family protein | DDQ68_RS13475 | Not Available | Positive | 3026659 - 3027690 | 37239.9 |
| aliphatic sulfonate abc transporter substrate-binding protein | DDQ68_RS13480 | Not Available | Positive | 3027736 - 3028767 | 36154.5 |
| abc transporter permease | DDQ68_RS13485 | Not Available | Positive | 3028819 - 3029652 | 29782.4 |
| abc transporter atp-binding protein | DDQ68_RS13490 | Not Available | Positive | 3029860 - 3030588 | 26182.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
