Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DDQ68_RS23915 | Not Available | Positive | 3009108 - 3009308 | 6338.78 |
| gfo/idh/moca family protein | DDQ68_RS23920 | Not Available | Positive | 3009339 - 3009644 | 11308.5 |
| hypothetical protein | DDQ68_RS23925 | Not Available | Positive | 3009648 - 3009998 | 12883.4 |
| hypothetical protein | DDQ68_RS23930 | Not Available | Positive | 3010101 - 3010274 | 6324.6 |
| duf4136 domain-containing protein | DDQ68_RS13415 | Not Available | Negative | 3010295 - 3010864 | 20989.8 |
| transposase | DDQ68_RS13420 | Not Available | Positive | 3011231 - 3011665 | 16446.0 |
| is1 family transposase | DDQ68_RS24790 | Not Available | Negative | 3011849 - 3012073 | 8635.7 |
| phosphatase pap2 family protein | DDQ68_RS13430 | Not Available | Positive | 3012592 - 3013299 | 26603.9 |
| aldo/keto reductase | DDQ68_RS13435 | Not Available | Negative | 3013399 - 3014262 | 31739.1 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DDQ68_RS13440 | Not Available | Negative | 3014472 - 3016418 | 70397.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
